Stem-loop sequence lgi-mir-2001

Accession MI0010260
Description Lottia gigantea miR-2001 stem-loop
Gene family MIPF0000711; mir-2001
Stem-loop 
uac  u       g   c   u    u        ag 
   cg gaccuuu uga cgu auaa gggcauuu  a
   || ||||||| ||| ||| |||| ||||||||  a
   gc cugggaa acu gca uauu cucgugaa  u
cuu  u       g   a   u    c        gu
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Genome context
Coordinates (JGI1) Overlapping transcripts
sca_150: 486292-486368 [-]
intergenic
Clustered miRNAs
< 10kb from lgi-mir-2001
lgi-mir-2001 sca_150: 486292-486368 [-]
lgi-mir-252b sca_150: 486110-486210 [-]
lgi-mir-252a sca_150: 483936-484036 [-]

Mature sequence lgi-miR-2001

Accession MIMAT0009731
Sequence

12 -  

uugugaccguuauaaugggcauu

 - 34

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Evidence not experimental

References

1
PMID:19196333 "The deep evolution of metazoan microRNAs" Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ Evol Dev. 11:50-68(2009).