miRBase entry: sko-mir-2011

Stem-loop sko-mir-2011


Accession
MI0010268
Description
Saccoglossus kowalevskii sko-mir-2011 precursor miRNA
Gene family
MIPF0000739; mir-2011


Sequence

auguguuuauuucaaugcggucacugucacaccuuaaggugucaaaauuaaauuacACCAAGGUGUGUUAGUGAUGACauugcaauagaacua
..((.((((((.(((((..(((((((.((((((((..(((((............))))))))))))).)))))))..))))).))))))))..

Structure
au  g      u     cg       u        aa     caaaa 
  gu uuuauu caaug  gucacug cacaccuu  ggugu     u
  || |||||| |||||  ||||||| ||||||||  |||||      
  ca agauaa guuaC  UAGUGAU GUGUGGAA  CCAca     u
au  -      c     AG       U        --     uuaaa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL012229.1: 416850-416942 [+]

Database links

Mature sko-miR-2011

Accession MIMAT0009739
Description Saccoglossus kowalevskii sko-miR-2011 mature miRNA
Sequence 57 - ACCAAGGUGUGUUAGUGAUGAC - 78
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68