Stem-loop spu-mir-2008

Accession

MI0010278

Description

Strongylocentrotus purpuratus spu-mir-2008 precursor miRNA

Gene family

MIPF0000729; mir-2008

Literature search

1 open access papers mention spu-mir-2008
(8 sentences)

Sequence

uucuccacuuuuuaccccguauuaacaauguggcugaugaggaaucuuaugaaccAUCAGCCUCGCUGUCAAUACGagguaaggagugacaa
.....(((((((((((.((((((.(((.((.((((((((.(...((....)).))))))))).)).))).)))))).)))))))))))....

Structure

uucuc           c      a   a  u        a gaa  u 
     cacuuuuuacc cguauu aca ug ggcugaug g   uc u
     ||||||||||| |||||| ||| || |||||||| |   ||  
     gugaggaaugg GCAUAA UGU GC CCGACUAc c   ag a
-aaca           a      C   C  U        - --a  u 

Annotation confidence Not enough data

Genome context

KN914988.1: 700461-700552 [+]

Mature spu-miR-2008

• Accession: MIMAT0009749
• Description: Strongylocentrotus purpuratus spu-miR-2008 mature miRNA
• Sequence: 56 - AUCAGCCUCGCUGUCAAUACG - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68