miRBase entry: spu-mir-2010

Stem-loop spu-mir-2010


Accession
MI0010280
Description
Strongylocentrotus purpuratus spu-mir-2010 precursor miRNA
Gene family
MIPF0002019; mir-2010


Sequence

cagcaagggcugguuucuccaguaauuuguaucuucauuauagcaucaaUUACUGUUGAUGUCAGCCCCUUgcugguau
(((((((((((((..((..(((((((((((............)))..))))))))..))..)))).)))))))))....

Structure
----         -    uu  uc        --   aucuu 
    cagcaaggg cugg  uc  caguaauu  ugu     c
    ||||||||| ||||  ||  ||||||||  |||      
    gucgUUCCC GACU  AG  GUCAUUaa  acg     a
uaug         C    GU  UU        cu   auauu 


Annotation confidence Not enough data
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Genome context
KN913154.1: 527767-527845 [+]

Database links

Mature spu-miR-2010

Accession MIMAT0009751
Description Strongylocentrotus purpuratus spu-miR-2010 mature miRNA
Sequence 50 - UUACUGUUGAUGUCAGCCCCUU - 71
Evidence experimental
454 [1]

References

  1. PubMed ID: 19196333
    The deep evolution of metazoan microRNAs
    "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
    "Evol Dev (2009) 11:50-68