miRBase entry: nve-mir-2024a-1

Stem-loop nve-mir-2024a-1


Accession
MI0010284
Description
Nematostella vectensis nve-mir-2024a-1 precursor miRNA
Gene family
MIPF0000697; mir-2024


Sequence

118167 reads, 72819 reads per million, 23 experiments
ugcuucAAAAUAUCGGUGUUGGGUAAAAggucacauuUUACACAGUACCGAUAUUGUGAagca
(((((((.(((((((((((((.((((((.......)))))).))))))))))))).)))))))

Structure
       A             G      gg 
ugcuucA AAUAUCGGUGUUG GUAAAA  u
||||||| ||||||||||||| ||||||  c
acgaAGU UUAUAGCCAUGAC CAUUuu  a
       G             A      ac 


Annotation confidence High
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Genome context
scaffold_1056: 1220-1282 [+]

Database links

Mature nve-miR-2024a-5p

Accession MIMAT0009757
Description Nematostella vectensis nve-miR-2024a-5p mature miRNA
Sequence 7 - AAAAUAUCGGUGUUGGGUAAAA - 28
Evidence experimental
454 [1], Illumina [2]

Mature nve-miR-2024a-3p

Accession MIMAT0009758
Description Nematostella vectensis nve-miR-2024a-3p mature miRNA
Sequence 38 - UUACACAGUACCGAUAUUGUGA - 59
Evidence experimental
454 [1], Illumina [2]

References

  1. PubMed ID: 18830242
    Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
    "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
    "Nature (2008) 455:1193-1197

  2. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663