miRBase entry: nve-mir-2025

Stem-loop nve-mir-2025


Accession
MI0010285
Description
Nematostella vectensis nve-mir-2025 precursor miRNA


Sequence

40994 reads, 39291 reads per million, 24 experiments
aacaauuaggccacauacaaAGCUUUCGAUGGCUAGAAAAUCcuuagugaUUUUUUAGCCCGCGGAAGUUGUguugccuggccaauauuaccauu
........(((((...(((.((((((((..((((((((((((......))))))))))))..)))))))).)))....)))))............

Structure
----aacaauua     -cau   a        AU            cu 
            ggcca    aca AGCUUUCG  GGCUAGAAAAUC  u
            |||||    ||| ||||||||  ||||||||||||   
            ccggu    ugU UUGAAGGC  CCGAUUUUUUag  a
uuaccauuauaa     ccgu   G        GC            ug 


Annotation confidence High
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Genome context
scaffold_51: 151656-151750 [-]

Database links

Mature nve-miR-2025-5p

Accession MIMAT0009759
Description Nematostella vectensis nve-miR-2025-5p mature miRNA
Sequence 21 - AGCUUUCGAUGGCUAGAAAAUC - 42
Evidence experimental
454 [1], Illumina [2]

Mature nve-miR-2025-3p

Accession MIMAT0009760
Description Nematostella vectensis nve-miR-2025-3p mature miRNA
Sequence 51 - UUUUUUAGCCCGCGGAAGUUGU - 72
Evidence experimental
454 [1], Illumina [2]

References

  1. PubMed ID: 18830242
    Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
    "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
    "Nature (2008) 455:1193-1197

  2. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663