miRBase entry: nve-mir-2024d

Stem-loop nve-mir-2024d


Accession
MI0010288
Description
Nematostella vectensis nve-mir-2024d precursor miRNA
Gene family
MIPF0000697; mir-2024


Sequence

32431 reads, 22361 reads per million, 23 experiments
caucagguagacuugcuucAGAAUAUUGGUGCUGGGCAAAAggucacauuuugcacaauuccaauauucugaggcacuucugcugaa
..((((.((((..((((((((((((((((...((.((((((.......)))))).))...))))))))))))))))..)))))))).

Structure
ca    g    cu                UGC  G      gg 
  ucag uaga  ugcuucAGAAUAUUGG   UG GCAAAA  u
  |||| ||||  ||||||||||||||||   || ||||||  c
  aguc gucu  acggagucuuauaacc   ac cguuuu  a
-a    -    uc                uua  a      ac 


Annotation confidence High
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Genome context
scaffold_126: 87407-87493 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from nve-mir-2024d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nve-miR-2024d

Accession MIMAT0009765
Description Nematostella vectensis nve-miR-2024d mature miRNA
Sequence 20 - AGAAUAUUGGUGCUGGGCAAAA - 41
Evidence experimental
454 [1]

References

  1. PubMed ID: 18830242
    Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
    "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
    "Nature (2008) 455:1193-1197