miRBase entry: nve-mir-2026

Stem-loop nve-mir-2026


Accession
MI0010291
Description
Nematostella vectensis nve-mir-2026 precursor miRNA


Sequence

77218 reads, 47026 reads per million, 24 experiments
acuuguguccccccgUUUCAAAUGUCUACUGAUGGAaguugguucCAUCAGUGGGUAUUUGAAGUUgagagacgcagaa
..(((((((.(.(..((((((((((((((((((((((.....))))))))))))))))))))))..).).)))))))..

Structure
ac       c c cg                      g 
  uuguguc c c  UUUCAAAUGUCUACUGAUGGAa u
  ||||||| | |  |||||||||||||||||||||| u
  gacgcag g g  GAAGUUUAUGGGUGACUACcuu g
aa       a a UU                      g 


Annotation confidence High
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Genome context
scaffold_61: 667309-667387 [-]

Database links

Mature nve-miR-2026-5p

Accession MIMAT0009770
Description Nematostella vectensis nve-miR-2026-5p mature miRNA
Sequence 16 - UUUCAAAUGUCUACUGAUGGA - 36
Evidence experimental
454 [1], Illumina [2]

Mature nve-miR-2026-3p

Accession MIMAT0009771
Description Nematostella vectensis nve-miR-2026-3p mature miRNA
Sequence 46 - CAUCAGUGGGUAUUUGAAGUU - 66
Evidence experimental
454 [1], Illumina [2]

References

  1. PubMed ID: 18830242
    Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
    "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
    "Nature (2008) 455:1193-1197

  2. PubMed ID: 24642861
    Cnidarian microRNAs frequently regulate targets by cleavage
    "Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H"
    "Genome Res (2014) 24:651-663