Stem-loop nve-mir-2041a

Accession

MI0010308

Description

Nematostella vectensis nve-mir-2041a precursor miRNA

Gene family

MIPF0001913; mir-2041

Sequence

270 reads, 1404 reads per million, 12 experiments

auccucggaaacccagggguAUUUUGCUCUUACGUUUCACUcgcgagUGAAACGUUAGAGCAAAAUACUccuggguuuccgaggauga
((((((((((((((((((((((((((((((.((((((((((....)))))))))).))))))))))))))))))))))))))))))..

Structure

--                              U          c 
  auccucggaaacccagggguAUUUUGCUCU ACGUUUCACU g
  |||||||||||||||||||||||||||||| ||||||||||  
  uaggagccuuuggguccUCAUAAAACGAGA UGCAAAGUga c
ag                              U          g 

Annotation confidence Not enough data

Genome context

scaffold_19: 418369-418456 [-]

Mature nve-miR-2041a-5p

• Accession: MIMAT0009804
• Description: Nematostella vectensis nve-miR-2041a-5p mature miRNA
• Sequence: 21 - AUUUUGCUCUUACGUUUCACU - 41
• Evidence: experimental ; 454 [1]

Mature nve-miR-2041a-3p

• Accession: MIMAT0009805
• Description: Nematostella vectensis nve-miR-2041a-3p mature miRNA
• Sequence: 48 - UGAAACGUUAGAGCAAAAUACU - 69
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18830242
   Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
   "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
   "Nature (2008) 455:1193-1197