miRBase entry: nve-mir-2048

Stem-loop nve-mir-2048


Accession
MI0010316
Description
Nematostella vectensis nve-mir-2048 precursor miRNA


Sequence

50 reads, 254 reads per million, 7 experiments
guauaaaGGCGUUUUGUUUUAGAUGUCUugagggagaacagucgagaaaggucucccucaagACACCUGAAACAAAACGCAAuga
........((((((((((((((.((((((((((((((.(..........).)))))))))))))).)))))))))))))).....

Structure
guauaaaG              A              a aguc 
        GCGUUUUGUUUUAG UGUCUugagggaga c    g
        |||||||||||||| |||||||||||||| |     
        CGCAAAACAAAGUC ACAgaacucccucu g    a
---aguAA              C              g aaag 


Annotation confidence Not enough data
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Genome context
scaffold_26: 921451-921535 [+]

Database links

Mature nve-miR-2048-5p

Accession MIMAT0009820
Description Nematostella vectensis nve-miR-2048-5p mature miRNA
Sequence 8 - GGCGUUUUGUUUUAGAUGUCU - 28
Evidence experimental
454 [1]

Mature nve-miR-2048-3p

Accession MIMAT0009821
Description Nematostella vectensis nve-miR-2048-3p mature miRNA
Sequence 63 - ACACCUGAAACAAAACGCAA - 82
Evidence experimental
454 [1]

References

  1. PubMed ID: 18830242
    Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
    "Grimson A, Srivastava M, Fahey B, Woodcroft BJ, Chiang HR, King N, Degnan BM, Rokhsar DS, Bartel DP"
    "Nature (2008) 455:1193-1197