miRBase entry: cfa-mir-133c

Stem-loop cfa-mir-133c

Accession

MI0010325

Description

Canis familiaris cfa-mir-133c precursor miRNA

Gene family

MIPF0000029; mir-133

Sequence

aaugcuuugcuaaagcugguaaaauggaaccaaaucaacuguucaauggauUUGGUCCCCUUCAACCAGCUGuagcugugcauuga
(((((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)))))..

Structure

--     uuu    a       aa  u  a        aacug 
  aaugc   gcua agcuggu  aa gg accaaauc     u
  |||||   |||| |||||||  || || ||||||||      
  uuacg   cgau UCGACCA  UU CC UGGUUuag     u
ag     ugu    G       AC  C  C        guaac

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr24: 46490501-46490586 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-mir-133c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature cfa-miR-133c

Accession	MIMAT0009833
Description	Canis familiaris cfa-miR-133c mature miRNA
Sequence	52 - UUGGUCCCCUUCAACCAGCUG - 72
Evidence	not_experimental

References

PubMed ID: 18215311
miRNAminer: a tool for homologous microRNA gene search
"Artzi S, Kiezun A, Shomron N"
"BMC Bioinformatics (2008) 9:39