Stem-loop cfa-let-7a-2

Accession

MI0010328

Description

Canis familiaris cfa-let-7a-2 precursor miRNA

Gene family

MIPF0000002; let-7

Sequence

cugcauguucccagguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaucaagggagauaacuguacagccuccuagcuuuccuugggucuugcac
.((((....((((((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).)))..))))))...)))).

Structure

c    uguu      uU   G   U             uagaauuac   aa 
 ugca    cccagg  GAG UAG AGGUUGUAUAGUU         auc  g
 ||||    ||||||  ||| ||| |||||||||||||         |||   
 acgu    ggguuc  uuc auc uccgacaugucaa         uag  g
c    -ucu      cu   g   c             ---------   ag 

Annotation confidence Not enough data

Genome context

chr5: 12052786-12052881 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from cfa-let-7a-2

Mature cfa-let-7a

• Accession: MIMAT0006594
• Description: Canis familiaris cfa-let-7a mature miRNA
• Sequence: 17 - UGAGGUAGUAGGUUGUAUAGUU - 38
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39