miRBase entry: cfa-mir-214

Stem-loop cfa-mir-214


Accession
MI0010342
Description
Canis familiaris cfa-mir-214 precursor miRNA
Gene family
MIPF0000062; mir-214


Sequence

ggccuggcuggacggaguugucaugugucugccugucuacacuugcugugcagaacauccgcucaccuguACAGCAGGCACAGACAGGCAGUcacaugacaacccagccu
.....((((((.....(((((((((((.((((((((((...((((((((((((.............))))))))))))...)))))))))).))))))))))))))))).

Structure
ggccu      acgga           u          aca            aacau 
     ggcugg     guugucaugug cugccugucu   cuugcugugcag     c
     ||||||     ||||||||||| ||||||||||   ||||||||||||     c
     ccgacc     caacaguacac GACGGACAGA   GGACGACAuguc     g
----u      -----           U          CAC            cacuc 


Annotation confidence Not enough data
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Genome context
chr7: 26818559-26818668 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cfa-mir-214
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-214

Accession MIMAT0009847
Description Canis familiaris cfa-miR-214 mature miRNA
Sequence 71 - ACAGCAGGCACAGACAGGCAGU - 92
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39