miRBase entry: cfa-mir-134

Stem-loop cfa-mir-134


Accession
MI0010382
Description
Canis familiaris cfa-mir-134 precursor miRNA
Gene family
MIPF0000112; mir-134


Sequence

cagggugUGUGACUGGUUGACCAGAGGGGcaagcacucuguucacccugugggccaccuagucaccaacccuc
.(((((..((((((((.((.(((.((((...((((...))))..)))).)))..)).))))))))..))))).

Structure
c     gU        U  -A   G    Gca    c 
 agggu  GUGACUGG UG  CCA AGGG   agca  
 |||||  |||||||| ||  ||| ||||   |||| u
 uccca  cacugauc ac  ggu uccc   uugu  
c     ac        c  cg   g    -ac    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 69283496-69283568 [+]
Clustered miRNAs
10 other miRNAs are < 10 kb from cfa-mir-134
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-134

Accession MIMAT0009883
Description Canis familiaris cfa-miR-134 mature miRNA
Sequence 8 - UGUGACUGGUUGACCAGAGGGG - 29
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39