miRBase entry: cfa-mir-377

Stem-loop cfa-mir-377


Accession
MI0010389
Description
Canis familiaris cfa-mir-377 precursor miRNA
Gene family
MIPF0000018; mir-154


Sequence

uugagcAGAGGUUGCCCUUGGUGAAUUCgcuuuauuuauguugaaucacacaaaggcaacuuuuguuug
..((((((((((((((.(((((((.(((((.........).)))))))).))).)))))))))))))).

Structure
uu              C   -    A    - uuu 
  gagcAGAGGUUGCC UUG GUGA UUCg c   a
  |||||||||||||| ||| |||| |||| |   u
  uuuguuuucaacgg aac cacu aagu g   u
-g              a   a    -    u uau 


Annotation confidence Not enough data
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Genome context
chr8: 69290937-69291005 [+]
Clustered miRNAs
8 other miRNAs are < 10 kb from cfa-mir-377
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cfa-miR-377

Accession MIMAT0009890
Description Canis familiaris cfa-miR-377 mature miRNA
Sequence 7 - AGAGGUUGCCCUUGGUGAAUUC - 28
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39