miRBase entry: cfa-mir-340

Stem-loop cfa-mir-340


Accession
MI0010391
Description
Canis familiaris cfa-mir-340 precursor miRNA
Gene family
MIPF0000191; mir-340


Sequence

uuguaccugaugcgaUUAUAAAGCAAUGAGACUGAUUgucaugugucgguugugggauccgucucaguuacuuuauagccgugccugguacc
..(((((.(.((((.((((((((...((((((.((((.(((((.......))))))))).))))))....)))))))).)))).).))))).

Structure
uu     u a    a        -CAA      U    g     ug 
  guacc g ugcg UUAUAAAG    UGAGAC GAUU ucaug  u
  ||||| | |||| ||||||||    |||||| |||| |||||  c
  caugg c gugc gauauuuc    acucug cuag ggugu  g
-c     u c    c        auug      c    -     ug 


Annotation confidence Not enough data
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Genome context
chr11: 1704582-1704673 [+]

Database links

Mature cfa-miR-340

Accession MIMAT0009892
Description Canis familiaris cfa-miR-340 mature miRNA
Sequence 16 - UUAUAAAGCAAUGAGACUGAUU - 37
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39