Stem-loop cfa-mir-544

Accession

MI0010409

Description

Canis familiaris cfa-mir-544 precursor miRNA

Gene family

MIPF0000436; mir-544

Sequence

auuuucaucaccuagggaucuuguuaaaaggcagauucugauuuagggaccaagAUUCUGCAUUUUUAGCAAGUUCccaagugaugcua
.....((((((...((((.((((((((((((((((.(((.............))).))))).))))))))))).))))..))))))...

Structure

auuuu      cua    u           -     u   gauuu 
     caucac   ggga cuuguuaaaag gcaga ucu     a
     ||||||   |||| ||||||||||| ||||| |||     g
     guagug   ccCU GAACGAUUUUU CGUCU Aga     g
--auc      -aa    U           A     U   accag 

Annotation confidence Not enough data

Genome context

chr8: 69277656-69277744 [+]

Clustered miRNAs

15 other miRNAs are < 10 kb from cfa-mir-544

Mature cfa-miR-544

• Accession: MIMAT0009910
• Description: Canis familiaris cfa-miR-544 mature miRNA
• Sequence: 55 - AUUCUGCAUUUUUAGCAAGUUC - 76
• Evidence: not_experimental

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39