miRBase entry: cfa-mir-551a

Stem-loop cfa-mir-551a


Accession
MI0010411
Description
Canis familiaris cfa-mir-551a precursor miRNA
Gene family
MIPF0000360; mir-551


Sequence

ggggacugccaggugacccuggaaauccagaguggguaaggccugucugauugugucuagGCGACCCACUCUUGGUUUCCAugguugcccugga
........((((((((((.((((((((.(((((((((...(((((...(((...)))))))).))))))))).)))))))).))))).))))).

Structure
ggggacug     -     c        c         aag     ucu   u 
        ccagg ugacc uggaaauc agagugggu   gccug   gau  
        ||||| ||||| |||||||| |||||||||   |||||   ||| g
        ggucc guugg ACCUUUGG UCUCACCCA   CGgau   cug  
-------a     c     u        U         --G     ---   u 


Annotation confidence Not enough data
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Genome context
chr5: 58112708-58112801 [-]

Database links

Mature cfa-miR-551a

Accession MIMAT0009912
Description Canis familiaris cfa-miR-551a mature miRNA
Sequence 61 - GCGACCCACUCUUGGUUUCCA - 81
Evidence not_experimental

References

  1. PubMed ID: 18215311
    miRNAminer: a tool for homologous microRNA gene search
    "Artzi S, Kiezun A, Shomron N"
    "BMC Bioinformatics (2008) 9:39