Stem-loop bta-mir-376c

Accession

MI0010446

Description

Bos taurus bta-mir-376c precursor miRNA

Gene family

MIPF0000091; mir-368

Literature search

4 open access papers mention bta-mir-376c
(7 sentences)

Sequence

661 reads, 18 reads per million, 60 experiments

uuugguauuuaaaagGUGGAUAUUCCUUCUAUGUUUAuguuauuugugguuaaacauagaggaaauuccacguuuucaguaucaaa
.((((((((.((((.(((((..(((((.(((((((((.............))))))))))))))..))))).)))).)))))))).

Structure

u        u    g     UA     U         uguua 
 uugguauu aaaa GUGGA  UUCCU CUAUGUUUA     u
 |||||||| |||| |||||  ||||| |||||||||     u
 aacuauga uuuu caccu  aagga gauacaaau     u
a        c    g     ua     -         uggug 

Annotation confidence High

Genome context

chr21: 67856685-67856770 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-376c

Mature bta-miR-376c

• Accession: MIMAT0009947
• Description: Bos taurus bta-miR-376c mature miRNA
• Sequence: 16 - GUGGAUAUUCCUUCUAUGUUUA - 37
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 18215311
   miRNAminer: a tool for homologous microRNA gene search
   "Artzi S, Kiezun A, Shomron N"
   "BMC Bioinformatics (2008) 9:39


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90