miRBase entry: bta-mir-1225

Stem-loop bta-mir-1225


Accession
MI0010452
Description
Bos taurus bta-mir-1225 precursor miRNA
Gene family
MIPF0000445; mir-1225


Sequence

7 reads, 3 reads per million, 7 experiments
guggguacggcccagggggggagagggacgcacccugggcccagcagagcccagggcgcagccggacugaCCGAGCCCCUGUGCCGCCCCCAG
.((((..((((.((((((.((..((((..((.((((((((.(....).)))))))).))..))...))..))...)))))).))))..)))).

Structure
g    ua    c      --g  ag  ---  ac  a        c a 
 uggg  cggc cagggg   gg  ag   gg  gc cccugggc c g
 ||||  |||| ||||||   ||  ||   ||  || |||||||| |  
 ACCC  GCCG GUCCCC   CC  uc   cc  cg gggacccg g c
G    CC    U      GAG  ag  agg  ga  c        a a 


Annotation confidence Not enough data
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Genome context
chr25: 1638363-1638455 [-]

Database links

Mature bta-miR-1225-3p

Accession MIMAT0009952
Description Bos taurus bta-miR-1225-3p mature miRNA
Sequence 71 - CCGAGCCCCUGUGCCGCCCCCAG - 93
Evidence not_experimental

References

  1. PubMed ID: 18945293
    Annotation of 390 bovine miRNA genes by sequence similarity with other species
    "Strozzi F, Mazza R, Malinverni R, Williams JL"
    "Anim Genet (2009) 40:125