Stem-loop bta-mir-7-2

Accession

MI0010462

Description

Bos taurus bta-mir-7-2 precursor miRNA

Gene family

MIPF0000022; mir-7

Literature search

9 open access papers mention bta-mir-7-2
(19 sentences)

Sequence

5237 reads, 181 reads per million, 70 experiments

uggauguuggucuaguucugugUGGAAGACUAGUGAUUUUGUUGUUuuuagauaacugaaucgacaacaaaucacagucugccauauggcacaggccaugccucuacag
((((.((((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).)))))))).)).))))...

Structure

---    u  -      a  u        A     A       U      --     a 
   ugga gu uggucu gu cugugUGG AGACU GUGAUUU GUUGUU  uuuag u
   |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
   aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaguc a
gac    c  u      -  c        g     -       -      cu     a 

Annotation confidence High

Genome context

chr8: 79020781-79020889 [-]

Mature bta-miR-7

• Accession: MIMAT0003843
• Description: Bos taurus bta-miR-7 mature miRNA
• Sequence: 23 - UGGAAGACUAGUGAUUUUGUUGUU - 46
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125