Stem-loop bta-mir-1185

Accession

MI0010478

Description

Bos taurus bta-mir-1185 precursor miRNA

Gene family

MIPF0000018; mir-154

Literature search

2 open access papers mention bta-mir-1185
(2 sentences)

Sequence

761 reads, 15 reads per million, 62 experiments

uuugguacuugaagAGAGGAUACCCUUUGUAUGUUcacuuuauuaauggcgaauauacagagggagacucuuauuugcguaucaaa
.(((((((.(((((((((..(.((((((((((((((.((........)).)))))))))))))))..))))).)))).))))))).

Structure

u       u    -     GA A              a  uua 
 uugguac ugaa gAGAG  U CCCUUUGUAUGUUc cu   u
 ||||||| |||| |||||  | |||||||||||||| ||    
 aacuaug guuu uucuc  a gggagacauauaag gg   u
a       c    a     ag -              c  uaa 

Annotation confidence High

Genome context

chr21: 67859743-67859828 [+]

Clustered miRNAs

17 other miRNAs are < 10 kb from bta-mir-1185

Mature bta-miR-1185

• Accession: MIMAT0009973
• Description: Bos taurus bta-miR-1185 mature miRNA
• Sequence: 15 - AGAGGAUACCCUUUGUAUGUU - 35
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125