Stem-loop bfl-mir-2071

Accession

MI0010509

Description

Branchiostoma floridae bfl-mir-2071 precursor miRNA

Gene family

MIPF0001681; mir-2071

Sequence

uccgcagguugaauAUGCGGUGCGGUGGUAGCAACCGUcccgacguaaagucgAUUGUUACACCGCGCCGCAAAAGuugac
.......(((((...((((((((((((.((((((......((((.....)))).))))))))))))))))))....)))))

Structure

uccgcag     -auA            G      CCGUcc    g 
       guuga    UGCGGUGCGGUG UAGCAA      cgac u
       |||||    |||||||||||| ||||||      |||| a
       caguu    ACGCCGCGCCAC AUUGUU      gcug a
-------     GAAA            -      -----A    a 

Annotation confidence Not enough data

Genome context

GG666487.1: 891953-892033 [-]

Mature bfl-miR-2071-3p

• Accession: MIMAT0009999
• Description: Branchiostoma floridae bfl-miR-2071-3p mature miRNA
• Sequence: 54 - AUUGUUACACCGCGCCGCAAAAG - 76
• Evidence: experimental ; cloned [1], 454 [2]

Mature bfl-miR-2071-5p

• Accession: MIMAT0019172
• Description: Branchiostoma floridae bfl-miR-2071-5p mature miRNA
• Sequence: 15 - AUGCGGUGCGGUGGUAGCAACCGU - 38
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27