miRBase entry: bfl-mir-34b

Stem-loop bfl-mir-34b


Accession
MI0010512
Description
Branchiostoma floridae bfl-mir-34b precursor miRNA
Gene family
MIPF0000039; mir-34


Sequence

uauugugcgcuacagAGGCAGUGAUGUCAGUUUGUUGUgugacacgagacgacAACAACUAACAUCACUGCCAAGgaaacgc
......(((.......(((((((((((.((((((((((.(......).))))))..)))).))))))))))).......)))

Structure
uauugu   cuacagA           C    --      g ga 
      gcg       GGCAGUGAUGU AGUU  UGUUGU u  c
      |||       ||||||||||| ||||  |||||| |   
      cgc       CCGUCACUACA UCAA  Acagca a  a
------   aaagGAA           A    CA      g gc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GG666486.1: 2117606-2117687 [-]

Database links

Mature bfl-miR-34b-3p

Accession MIMAT0010002
Description Branchiostoma floridae bfl-miR-34b-3p mature miRNA
Sequence 54 - AACAACUAACAUCACUGCCAAG - 75
Evidence experimental
cloned [1], 454 [2]

Mature bfl-miR-34b-5p

Accession MIMAT0019174
Description Branchiostoma floridae bfl-miR-34b-5p mature miRNA
Sequence 16 - AGGCAGUGAUGUCAGUUUGUUGU - 38
Evidence experimental
454 [2]

References

  1. PubMed ID: 19196332
    Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
    "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
    "Evol Dev (2009) 11:41-49

  2. PubMed ID: 21210939
    microRNA complements in deuterostomes: origin and evolution of microRNAs
    "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
    "Evol Dev (2011) 13:15-27