miRBase entry: osa-MIR2102

Stem-loop osa-MIR2102


Accession
MI0010562
Description
Oryza sativa osa-MIR2102 precursor miRNA

Literature search
2 open access papers mention osa-MIR2102
(3 sentences)

Sequence

ccgaugguaGGGCAAGCCGCCGCCGCCACcaccaccgcugccaugcggaugacaaacuucuagcucuucggaucCAUGGUGCCGGUUCCGGUGGCGuccauggcgacgg
(((.((.((((((..((((((((((.(((((.((((((......)))).)).......(((........)))....))))).)))...))))))))))).)).)).)))

Structure
   a  g  -    AA       ---   C     ------------------------c  -    ug 
ccg ug ua GGGC  GCCGCCG   CCG CACca                         ca ccgc  c
||| || || ||||  |||||||   ||| |||||                         || ||||   
ggc gc gu ccuG  CGGUGGC   GGC GUGGU                         gu ggcg  c
   a  g  a    --       CUU   C     ACcuaggcuucucgaucuucaaaca  a    ua 


Annotation confidence Not enough data
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Genome context
Chr5: 18250483-18250591 [+]

Database links

Mature osa-miR2102-5p

Accession MIMAT0010068
Description Oryza sativa osa-miR2102-5p mature miRNA
Sequence 10 - GGGCAAGCCGCCGCCGCCAC - 29
Evidence experimental
Illumina [1]

Mature osa-miR2102-3p

Accession MIMAT0010069
Description Oryza sativa osa-miR2102-3p mature miRNA
Sequence 75 - CAUGGUGCCGGUUCCGGUGGCG - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19103661
    Characterization and expression profiles of miRNAs in rice seeds
    "Xue LJ, Zhang JJ, Xue HW"
    "Nucleic Acids Res (2009) 37:916-930