miRBase entry: lja-MIR167

Stem-loop lja-MIR167


Accession
MI0010580
Description
Lotus japonicus lja-MIR167 precursor miRNA
Gene family
MIPF0000023; MIR167_1


Sequence

guucgugcaccugcaauaguUGAAGCUGCCAGCAUGAUCUGagcuuaccuucuuguaauaaugguaagaacagaucauauggcagcuucaccuguugaauggaagcau
....((((.((..((((((.(((((((((((..((((((((..((((((.............))))))..)))))))).))))))))))).))))))...))..))))

Structure
guuc    -a  -ug      u           GC        ag      uucuu 
    gugc  cc   caauag UGAAGCUGCCA  AUGAUCUG  cuuacc     g
    ||||  ||   |||||| |||||||||||  ||||||||  ||||||     u
    uacg  gg   guuguc acuucgacggu  uacuagac  gaaugg     a
----    aa  uaa      c           -a        aa      uaaua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature lja-miR167

Accession MIMAT0010087
Description Lotus japonicus lja-miR167 mature miRNA
Sequence 21 - UGAAGCUGCCAGCAUGAUCUG - 41
Evidence not_experimental

References

  1. PubMed ID: 19084500
    Identification and expression analysis of miRNAs from nitrogen-fixing soybean nodules
    "Wang Y, Li P, Cao X, Wang X, Zhang A, Li X"
    "Biochem Biophys Res Commun (2009) 378:799-803