Stem-loop tca-mir-970

Accession

MI0010585

Description

Tribolium castaneum tca-mir-970 precursor miRNA

Literature search

1 open access papers mention tca-mir-970
(1 sentences)

Sequence

aaacgaugccggcggcAGCUCAGCGUGUGUCGUACUGAUAguguuaucacuagcuaUCAUAAGACACACGCGGCUAUcgccggucucuccu
....((.((((((((.((((..(((((((((....(((((((..........)))))))...))))))))))))).)))))))).))....

Structure

aaac  u        c    CA         GUAC       guua 
    ga gccggcgg AGCU  GCGUGUGUC    UGAUAgu    u
    || |||||||| ||||  |||||||||    |||||||     
    cu uggccgcU UCGG  CGCACACAG    ACUaucg    c
uccu  c        A    --         -AAU       auca 

Annotation confidence Not enough data

Genome context

ChLG2: 10499950-10500040 [+]

Mature tca-miR-970-3p

• Accession: MIMAT0010092
• Description: Tribolium castaneum tca-miR-970-3p mature miRNA
• Sequence: 57 - UCAUAAGACACACGCGGCUAU - 77
• Evidence: experimental ; SOLID [1]

Mature tca-miR-970-5p

• Accession: MIMAT0019179
• Description: Tribolium castaneum tca-miR-970-5p mature miRNA
• Sequence: 17 - AGCUCAGCGUGUGUCGUACUGAUA - 40
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696