Stem-loop sequence bmo-mir-965

Accession MI0010623
Description Bombyx mori miR-965 stem loop
Gene family MIPF0000708; mir-965
Stem-loop 
auauaaaug  -           ac             g    a    ucaau 
         gc ugcauagcuaa  gggagaagcuaua cgcu uaug     a
         || |||||||||||  ||||||||||||| |||| ||||     u
         cg acguauugguu  cccuuuucgauau gcga auac     u
-cucuuaua  u           -c             -    -    uaaaa
Get sequence
Deep sequencing
3238 reads, 3 experiments
Genome context
Coordinates Overlapping transcripts
nscaf2847: 8391858-8391961 [-]
intergenic

Mature sequence bmo-miR-965-5p

Accession MIMAT0015295
Previous IDs bmo-miR-965
Sequence

24 -  

cgggagaagcuauagcgcuauaug

 - 47

Get sequence
Deep sequencing 2216 reads, 3 experiments
Evidence experimental; Solexa [2]

Mature sequence bmo-miR-965-3p

Accession MIMAT0010126
Previous IDs bmo-miR-965;bmo-miR-965*
Sequence

63 -  

uaagcguauagcuuuuccccuu

 - 84

Get sequence
Deep sequencing 1022 reads, 3 experiments
Evidence experimental; Solexa [2]

References

1
" Griffiths-Jones S Unpublished (2009).
2
PMID:20199675 "MicroRNAs of Bombyx mori identified by Solexa sequencing" Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q BMC Genomics. 11:148(2010).