miRBase entry: bol-MIR157a

Stem-loop bol-MIR157a


Accession
MI0010663
Description
Brassica oleracea bol-MIR157a precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
7 open access papers mention bol-MIR157a
(18 sentences)

Sequence

gguugUUGACAGAAGAUAGAGAGCACuaaggaugacaugcaaguacaaggauauaaggaaauucgcaucuuuacucuuuugugcucucuauacuucugucaauacc
(((.((((((((((((((((((((((.((((((((.((((.(((................))).))))..))).))))).))))))))))).))))))))))))))

Structure
   u           -           u     -   -c    a   acaagga 
ggu gUUGACAGAAG AUAGAGAGCAC aagga uga  augc agu       u
||| ||||||||||| ||||||||||| ||||| |||  |||| |||        
cca uaacugucuuc uaucucucgug uuucu auu  uacg uua       a
   -           a           u     c   uc    c   aaggaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature bol-miR157a

Accession MIMAT0010169
Description Brassica oleracea bol-miR157a mature miRNA
Sequence 6 - UUGACAGAAGAUAGAGAGCAC - 26
Evidence not_experimental

References

  1. PubMed ID: 18558089
    Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica
    "He XF, Fang YY, Feng L, Guo HS"
    "FEBS Lett (2008) 582:2445-2452