Stem-loop sja-mir-125a

Accession

MI0010671

Description

Schistosoma japonicum sja-mir-125a precursor miRNA

Gene family

MIPF0000733; mir-125_2

Literature search

8 open access papers mention sja-mir-125a
(28 sentences)

Sequence

gcUCCCUGAGACCCUUUGAUUGUCucguuaaacauaauucuauauguuaaauguaaucaggcagccaaagugacucaggugugc
((.(((((((.(.(((((.((((((((((.((((((......)))))).)))).....)))))).))))).).)))))).).))

Structure

  U -      A C     A      -----    a      au 
gc C CCUGAG C CUUUG UUGUCu     cguu aacaua  u
|| | |||||| | ||||| ||||||     |||| ||||||   
cg g ggacuc g gaaac gacgga     guaa uuguau  c
  u u      a u     c      cuaau    a      au 

Annotation confidence Not enough data

Genome context

CABF01024723.1: 7689-7772 [+]

Mature sja-miR-125a

• Accession: MIMAT0010178
• Description: Schistosoma japonicum sja-miR-125a mature miRNA
• Sequence: 3 - UCCCUGAGACCCUUUGAUUGUC - 24
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 19107204
   Identification and characterization of novel microRNAs from Schistosoma japonicum
   Xue X, Sun J, Zhang Q, Wang Z, Huang Y, Pan W
   PLoS One (2008) 3:e4034


2. PubMed ID: 20161724
   An "in-depth" description of the small non-coding RNA population of Schistosoma japonicum schistosomulum
   Wang Z, Xue X, Sun J, Luo R, Xu X, Jiang Y, Zhang Q, Pan W
   PLoS Negl Trop Dis (2010) 4:e596