Stem-loop bfl-mir-135b-1

Accession

MI0010689

Description

Branchiostoma floridae bfl-mir-135b-1 precursor miRNA

Gene family

MIPF0000028; mir-135

Sequence

ccguguccAAUGGCUUUCAUCCUUUGUGAaugucugagcacaguucacacugauggggguuauuggacaaga
...((((((((((((((((((...(((((((((......))).))))))..))))))))))))))))))...

Structure

ccg                  CUU      -   cu 
   uguccAAUGGCUUUCAUC   UGUGAa ugu  g
   ||||||||||||||||||   |||||| |||   
   acagguuauuggggguag   acacuu aca  a
aga                  -uc      g   cg 

Annotation confidence Not enough data

Genome context

GG666574.1: 3847619-3847690 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from bfl-mir-135b-1

Mature bfl-miR-135b

• Accession: MIMAT0010194
• Description: Branchiostoma floridae bfl-miR-135b mature miRNA
• Sequence: 9 - AAUGGCUUUCAUCCUUUGUGA - 29
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68