miRBase entry: osa-MIR2121b

Stem-loop osa-MIR2121b


Accession
MI0010710
Description
Oryza sativa osa-MIR2121b precursor miRNA
Gene family
MIPF0000765; MIR2121


Sequence

126 reads, 110 reads per million, 2 experiments
gcgcuaauaagucguuucauuuugcgugcgugagaguuuucaagaaccuccugucuaaccaacccaaaauuggguuggccacguauaguccaaggaugugugugugagaugcauucauuuaugugcguugggaacucauucccuccgcacggAAAACGGAGCGGUCCAUUAGCGCGu
((((((((...(((((((.((((.((((((.(((.((((....)))))))........((((((((....)))))))).(((((((((((....))).)))))))).(((((((........)))))))(((((....)))))..)))))).)))).)))))))...))))))))..

Structure
--        aag       a    g      ugagaguuuucaagaaccuccugucuaaccaacccaaaauuggguuggc        -   c 
  gcgcuaau   ucguuuc uuuu cgugcg                                                 cacguaua guc a
  ||||||||   ||||||| |||| ||||||                                                 |||||||| |||  
  CGCGAUUA   GGCGAGG AAAA gcacgc                                                 gugugugu uag a
uG        CCU       C    g      ----------cucccuuacucaaggguugcguguauuuacuuacguaga        g   g 


Annotation confidence Not enough data
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Comments
Huang et al. incorrectly named this sequence miR602 in [1].

Genome context
Chr4: 16882244-16882420 [+]

Database links

Mature osa-miR2121b

Accession MIMAT0011181
Description Oryza sativa osa-miR2121b mature miRNA
Sequence 153 - AAAACGGAGCGGUCCAUUAGCGCG - 176
Evidence experimental
cloned [1]
Database links

References

  1. PubMed ID: 19081140
    Heavy metal-regulated new microRNAs from rice
    "Huang SQ, Peng J, Qiu CX, Yang ZM"
    "J Inorg Biochem (2009) 103:282-287