Stem-loop sequence sme-mir-2154-1

AccessionMI0010784 (change log)
DescriptionSchmidtea mediterranea miR-2154-1 stem-loop
Gene family MIPF0000781; mir-2154
Stem-loop
   ----uucg      uauu     uuc          uu   a      a     aau 
5'         agugau    agaau   agcuguacaa  ggc uugugu ugaua   g
           ||||||    |||||   ||||||||||  ||| |||||| |||||    
3'         ucacua    uuuua   ucgauauguu  cug aacaca auuau   a
   ccaccuaa      --uu     uau          -u   -      -     aua 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig21503: 11131-11237 [+]
intergenic
Database links

Mature sequence sme-miR-2154-5p

Accession MIMAT0011244
Previous IDssme-miR-2154
Sequence

21 - 

ucagcuguacaauuggcauugugu

 - 44

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Evidence experimental; Illumina [1-2], 454 [2]

Mature sequence sme-miR-2154-3p

Accession MIMAT0011412
Previous IDssme-miR-2154*
Sequence

66 - 

acaagucuuuguauagcuuau

 - 86

Get sequence
Evidence experimental; Illumina [1-2], 454 [2]

References

1
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
2
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).