Stem-loop sme-mir-754d

Accession

MI0010810

Description

Schmidtea mediterranea sme-mir-754d precursor miRNA

Gene family

MIPF0000749; mir-754

Sequence

acgaugcauucacccagcauGUUGCUUGGGGGUAUUAUuauauuuauugauauaguuuuaucuucaagcaauaucagagguggaauauucaaca
..((....(((((((.(.((((((((((((((((..((((((((....))))))))..))))))))))))))))).).))))))....))....

Structure

--ac  ugca      - a c                UU        u 
    ga    uucacc c g auGUUGCUUGGGGGUA  AUuauauu a
    ||    |||||| | | ||||||||||||||||  ||||||||  
    cu    aggugg g c uauaacgaacuucuau  ugauauag u
acaa  uaua      a a -                uu        u 

Annotation confidence Not enough data

Genome context

Contig850: 63816-63909 [-]

Mature sme-miR-754d

• Accession: MIMAT0011268
• Description: Schmidtea mediterranea sme-miR-754d mature miRNA
• Sequence: 21 - GUUGCUUGGGGGUAUUAU - 38
• Evidence: experimental ; 454 [1], Illumina [1]

References

1. PubMed ID: 19564616
   High-resolution profiling and discovery of planarian small RNAs
   "Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N"
   "Proc Natl Acad Sci U S A (2009) 106:11546-11551