Stem-loop sequence sme-mir-96b

Accession MI0010817
Description Schmidtea mediterranea miR-96b stem-loop
Stem-loop 
---uaucaaa     g     aauuu        a     c     -ca   g 
          caguu ucuga     ggcacuua ggaau gucac   guu c
          ||||| |||||     |||||||| ||||| |||||   ||| a
          guuag agacu     cugugaau cuuua cagug   uag u
ucuacuauug     -     auuau        -     -     uua   u
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig4508: 34953-35054 [-]
intergenic

Mature sequence sme-miR-96b-5p

Accession MIMAT0011273
Previous IDs sme-miR-96b
Sequence

21 -  

uuuggcacuuaaggaaucgucac

 - 43

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Evidence experimental; 454 [1], Solexa [1-2]

Mature sequence sme-miR-96b-3p

Accession MIMAT0012163
Previous IDs sme-miR-96b*
Sequence

62 -  

gacauuucuaagugucuauuau

 - 83

Get sequence
Evidence experimental; 454 [1], Solexa [1-2]

References

1
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).
2
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).