miRBase entry: dre-mir-2184

Stem-loop dre-mir-2184


Accession
MI0010834
Description
Danio rerio dre-mir-2184 precursor miRNA

Literature search
2 open access papers mention dre-mir-2184
(9 sentences)

Sequence

24739 reads, 1636 reads per million, 11 experiments
cugaaugaugcccuaagcccuaAACAGUAAGAGUUUAUGUGCUgagguuaaaaauucagcacauugucucuuacuuguagggaaaaggguuucuaucggccugucacauu
((((..((.(((((...(((((...((((((((...((((((((((........))))))))))...))))))))..)))))...))))).))..))))...........

Structure
-----------    au  u     aag     AAC        UUU          guu 
           cuga  ga gcccu   cccua   AGUAAGAG   AUGUGCUgag   a
           ||||  || |||||   |||||   ||||||||   ||||||||||    
           ggcu  cu uggga   gggau   ucauucuc   uacacgacuu   a
uuacacugucc    au  u     aaa     -gu        ugu          aaa 


Annotation confidence High
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Genome context
chr10: 35654245-35654354 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from dre-mir-2184
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dre-miR-2184

Accession MIMAT0011288
Description Danio rerio dre-miR-2184 mature miRNA
Sequence 23 - AACAGUAAGAGUUUAUGUGCU - 43
Evidence experimental
454 [1]
Database links
Predicted targets

References

  1. PubMed ID: 19397817
    Parallel DNA pyrosequencing unveils new zebrafish microRNAs
    Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
    BMC Genomics (2009) 10:195