miRBase entry: dre-mir-455-2

Stem-loop dre-mir-455-2


Accession
MI0010844
Description
Danio rerio dre-mir-455-2 precursor miRNA
Gene family
MIPF0000129; mir-455

Literature search
1 open access papers mention dre-mir-455-2
(1 sentences)

Sequence

2312 reads, 253 reads per million, 11 experiments
aucguuguucccugaagugaggGUAUGUGCCCUUGGACUACAUUguggaggccagcaccAUGCAGUCCAUGGGCAUAUACACuuacuucauggccuacaucaaca
...(.(((.((.(((((((((.((((((((((.((((((.(((.(((........))).))).)))))).)))))))))).))))))))).))...))).)....

Structure
-auc u   --u  c         g          U      A   U   gag 
    g ugu   cc ugaagugag GUAUGUGCCC UGGACU CAU gug   g
    | |||   || ||||||||| |||||||||| |||||| ||| |||    
    c aca   gg acuucauuC CAUAUACGGG ACCUGA GUA cac   c
acaa u   ucc  u         A          U      C   c   gac 


Annotation confidence High
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Genome context
chr16: 51776536-51776640 [+]

Database links

Mature dre-miR-455-2-5p

Accession MIMAT0011302
Description Danio rerio dre-miR-455-2-5p mature miRNA
Sequence 23 - GUAUGUGCCCUUGGACUACAUU - 44
Evidence experimental
454 [1]
Database links
Predicted targets

Mature dre-miR-455-3p

Accession MIMAT0031993
Description Danio rerio dre-miR-455-3p mature miRNA
Sequence 60 - AUGCAGUCCAUGGGCAUAUACAC - 82
Evidence not_experimental

References

  1. PubMed ID: 19397817
    Parallel DNA pyrosequencing unveils new zebrafish microRNAs
    Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
    BMC Genomics (2009) 10:195