Stem-loop sbi-MIR171g

Accession

MI0010880

Description

Sorghum bicolor sbi-MIR171g precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

2 open access papers mention sbi-MIR171g
(2 sentences)

Sequence

uauuggugagguucaauccgaugauagguuuuacaaacagcuguaaaaucaguaucUGAUUGAGCCGCGCCAAUAUC
((((((((.(((((((((.((((...(((((((((......)))))))))..)))).))))))))).))))))))..

Structure

--        a         c    aua         aa 
  uauuggug gguucaauc gaug   gguuuuaca  c
  |||||||| ||||||||| ||||   |||||||||   
  AUAACCGC CCGAGUUAG cuau   cuaaaaugu  a
CU        G         U    -ga         cg 

Annotation confidence Not enough data

Genome context

chr10: 54394753-54394829 [+]

Mature sbi-miR171g

• Accession: MIMAT0011340
• Description: Sorghum bicolor sbi-miR171g mature miRNA
• Sequence: 57 - UGAUUGAGCCGCGCCAAUAUC - 77
• Evidence: not_experimental

References

1. PubMed ID: 19189423
   The Sorghum bicolor genome and the diversification of grasses
   "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
   "Nature (2009) 457:551-556