miRBase entry: sbi-MIR393b

Stem-loop sbi-MIR393b


Accession
MI0010888
Description
Sorghum bicolor sbi-MIR393b precursor miRNA
Gene family
MIPF0000083; MIR393

Literature search
1 open access papers mention sbi-MIR393b
(1 sentences)

Sequence

UCCAAAGGGAUCGCAUUGAUCucaccugccgcccgccgcugcgccugcgcgcgaggggacaagaucagugcaaucccuuuggaa
(((((((((((.((((((((((....((((.((((((((.......))).))).)))).)))))))))))).))))))))))).

Structure
-           C          cacc  -  g  -   -   ug 
 UCCAAAGGGAU GCAUUGAUCu    ug cc cc cgc cgc  c
 ||||||||||| ||||||||||    || || || ||| |||  g
 agguuucccua cgugacuaga    ac gg gg gcg gcg  c
a           a          ----  a  -  a   c   uc 


Annotation confidence Not enough data
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Genome context
chr6: 60459887-60459970 [-]

Database links

Mature sbi-miR393b

Accession MIMAT0011348
Description Sorghum bicolor sbi-miR393b mature miRNA
Sequence 1 - UCCAAAGGGAUCGCAUUGAUC - 21
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556