miRBase entry: sbi-MIR394b

Stem-loop sbi-MIR394b


Accession
MI0010889
Description
Sorghum bicolor sbi-MIR394b precursor miRNA
Gene family
MIPF0000100; MIR394

Literature search
1 open access papers mention sbi-MIR394b
(2 sentences)

Sequence

cUUGGCAUUCUGUCCACCUCCuugccgaucgaucuugcagaaaguuuuuuuuuggaggugggcauacugccaaugga
.((((((...(((((((((((........(..(((...)))..).........)))))))))))...))))))....

Structure
---c      UUC           -uugccgau ga   u 
    UUGGCA   UGUCCACCUCC         c  ucu  
    ||||||   |||||||||||         |  ||| g
    aaccgu   acggguggagg         g  aga  
aggu      cau           uuuuuuuuu aa   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature sbi-miR394b

Accession MIMAT0011349
Description Sorghum bicolor sbi-miR394b mature miRNA
Sequence 2 - UUGGCAUUCUGUCCACCUCC - 21
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556