miRBase entry: sbi-MIR437q

Stem-loop sbi-MIR437q


Accession
MI0010917
Description
Sorghum bicolor sbi-MIR437q precursor miRNA
Gene family
MIPF0000746; MIR437

Literature search
3 open access papers mention sbi-MIR437q
(5 sentences)

Sequence

guagucaaccuucucgaacuuugacaaguuaauagaaaaauauaauuaacaucuacgaugccaaaugaaugcaucaucaaaauaaauuuguugucguagucuuguagucaucgcugccucuuucuauagaguugguaAAAGUUAGAGAAGUUUGACUUag
..((((((.((((((.((((((..(((.((.(((((((..............((((((((.(((((...................))))).))))))))....(((((....)))))...))))))).)).)))...)))))).)))))).))))))...

Structure
-gu      c      g      -ga   g  a       -------aauauaauuaacau        c     gaaugcau 
   agucaa cuucuc aacuuu   caa uu auagaaa                     cuacgaug caaau        c
   |||||| |||||| ||||||   ||| || |||||||                     |||||||| |||||        a
   UCAGUU GAAGAG UUGAAA   guu ag uaucuuu                     gaugcugu guuua        u
gaU      U      A      aug   g  a       cuccgucgcuacugauguucu        u     aauaaaac 


Annotation confidence Not enough data
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Genome context
chr6: 10928435-10928594 [-]

Database links

Mature sbi-miR437q

Accession MIMAT0011377
Description Sorghum bicolor sbi-miR437q mature miRNA
Sequence 138 - AAAGUUAGAGAAGUUUGACUU - 158
Evidence not_experimental

References

  1. PubMed ID: 19189423
    The Sorghum bicolor genome and the diversification of grasses
    "Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Nare"
    "Nature (2009) 457:551-556