Stem-loop sequence sme-mir-76

Accession

MI0010935 (change log)

Description

Schmidtea mediterranea miR-76 stem-loop

Literature search

1 open access papers mention sme-mir-76
(1 sentences)

Stem-loop

   ---gaua        --      u             g   u    
5'        aacauuuu  ucauuc uaaacaaugaaua uuu ucc 
          ||||||||  |||||| ||||||||||||| ||| || a
3'        uuguaaag  aguaag auuuguugcuuau aaa agu 
   uuuacga        ag      u             g   c    

Confidence

Annotation confidence: not enough data

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Genome context

Coordinates (WUSTL3.1)	Overlapping transcripts
Contig18565: 5370-5455 [+]	intergenic
Contig20679: 1223-1308 [+]	intergenic
Contig26227: 10704-10789 [-]	intergenic

Database links

• miRBase Tracker:MI0010935

Mature sequence sme-miR-76-5p

• Accession: MIMAT0011396
• Previous IDs: sme-miR-76*
• Sequence: 13 - ucauucuuaaacaaugaaua - 32
• Evidence: experimental; Illumina [1]

Mature sequence sme-miR-76-3p

• Accession: MIMAT0011397
• Previous IDs: sme-miR-76
• Sequence: 52 - uucguuguuuaugaaugagaga - 73
• Evidence: experimental; Illumina [1]

References

1. PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).