miRBase entry: sme-mir-2206

Stem-loop sme-mir-2206


Accession
MI0010939
Description
Schmidtea mediterranea sme-mir-2206 precursor miRNA


Sequence

cAGGGCAGGCAUAGCUAAGUGguuacuucucacuggaaaauggauuucuaaucauuugACCACUGGUGCGAUCCUGCCuuuuac
.((((((((.((.((..((((((((........((((((.....))))))......))))))))...)).))))))))))....

Structure
---c        C  A  -UA        cuucucac      a 
    AGGGCAGG AU GC   AGUGguua        uggaaa u
    |||||||| || ||   ||||||||        |||||| g
    uuCCGUCC UA CG   UCACCAgu        aucuuu g
cauu        -  G  UGG        --uuacua      a 


Annotation confidence Not enough data
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Genome context
Contig9421: 12895-12978 [-]

Database links

Mature sme-miR-2206-5p

Accession MIMAT0011402
Description Schmidtea mediterranea sme-miR-2206-5p mature miRNA
Sequence 2 - AGGGCAGGCAUAGCUAAGUG - 21
Evidence experimental
Illumina [1]

Mature sme-miR-2206-3p

Accession MIMAT0011403
Description Schmidtea mediterranea sme-miR-2206-3p mature miRNA
Sequence 59 - ACCACUGGUGCGAUCCUGCC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19553344
    Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
    "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
    "RNA (2009) 15:1483-1491