Stem-loop sequence sme-mir-2160-2

Accession MI0010948
Description Schmidtea mediterranea miR-2160-2 stem-loop
Gene family MIPF0000769; mir-2160
Stem-loop 
c        uaa  a   - g        u          guacua 
 uuugugau   au ugg c cuuaugug agaaccgguu      u
 ||||||||   || ||| | |||||||| ||||||||||       
 aaacacua   ua acc g gaauguac uuuuggucaa      a
a        uga  a   u a        u          auuuuu
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Genome context
Coordinates (WUSTL3.1) Overlapping transcripts
Contig31371: 1017-1109 [+]
intergenic

Mature sequence sme-miR-2160-5p

Accession MIMAT0011254
Previous IDs sme-miR-2160
Sequence

16 -  

uggcgcuuauguguagaaccgg

 - 37

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Evidence experimental; Solexa [1-2], 454 [2]

Mature sequence sme-miR-2160-2-3p

Accession MIMAT0013776
Previous IDs sme-miR-2160-2*
Sequence

58 -  

gguuuuucauguaagagucc

 - 77

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Evidence experimental; Solexa [1]

References

1
PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).
2
PMID:19564616 "High-resolution profiling and discovery of planarian small RNAs" Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N Proc Natl Acad Sci U S A. 106:11546-11551(2009).