Stem-loop sequence sme-mir-2203

Accession

MI0010950 (change log)

Description

Schmidtea mediterranea miR-2203 stem-loop

Stem-loop

   a         -gaa  -  uaa      uc     caaa 
5'  aaaauuuac    gg cu   ugauua  auuua    c
    |||||||||    || ||   ||||||  |||||     
3'  uuuugaaug    cu ga   acuaau  uaaau    c
   -         auug  a  ---      --     uaaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (WUSTL3.1): Contig43306: 3412-3483 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0010950

Mature sequence sme-miR-2203-5p

• Accession: MIMAT0011419
• Previous IDs: sme-miR-2203*
• Sequence: 9 - acgaaggcuuaaugauuaucau - 30
• Evidence: experimental; Illumina [1]

Mature sequence sme-miR-2203-3p

• Accession: MIMAT0011420
• Previous IDs: sme-miR-2203
• Sequence: 51 - aucaagaucguuaguaaguu - 70
• Evidence: experimental; Illumina [1]

References

1. PMID:19553344 "Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea" Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR RNA. 15:1483-1491(2009).