Stem-loop cel-mir-2215

Accession

MI0010965

Description

Caenorhabditis elegans cel-mir-2215 precursor miRNA

Literature search

1 open access papers mention cel-mir-2215
(1 sentences)

Sequence

201 reads, 3 reads per million, 11 experiments

ACAGCACGUGUUACGAUGCUCCguuaguucggaguuuuuacggAGAAUCGUAGCGCGUGUUGUUU
(((((((((((((((((.((((((...............)))))).)))))))))))))))))..

Structure

--                 G      uaguuc 
  ACAGCACGUGUUACGAU CUCCgu      g
  ||||||||||||||||| ||||||      g
  UGUUGUGCGCGAUGCUA GAggca      a
UU                 A      uuuuug 

Annotation confidence Not enough data

Genome context

chrII: 13333763-13333827 [-]

Mature cel-miR-2215-5p

• Accession: MIMAT0011445
• Description: Caenorhabditis elegans cel-miR-2215-5p mature miRNA
• Sequence: 1 - ACAGCACGUGUUACGAUGCUCC - 22
• Evidence: experimental ; Illumina [1]

Mature cel-miR-2215-3p

• Accession: MIMAT0011446
• Description: Caenorhabditis elegans cel-miR-2215-3p mature miRNA
• Sequence: 44 - AGAAUCGUAGCGCGUGUUGUUU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19460142
   Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
   Kato M, de Lencastre A, Pincus Z, Slack FJ
   Genome Biol (2009) 10:R54