miRBase entry: cel-mir-2218a

Stem-loop cel-mir-2218a


Accession
MI0010970
Description
Caenorhabditis elegans cel-mir-2218a precursor miRNA


Sequence

21 reads, 1 reads per million, 7 experiments
CAAACUACAAGUUUUAAGCCUCAccaaaaguugggugAGGCCAGAAUAGUGUAGUUUGUA
(((((((((...(((..((((((((........))))))))..)))...)))))))))..

Structure
--         AGU   AA        aaa 
  CAAACUACA   UUU  GCCUCAcc   a
  |||||||||   |||  ||||||||    
  GUUUGAUGU   AAG  CGGAgugg   g
AU         GAU   AC        guu 


Annotation confidence Not enough data
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Genome context
chrI: 13812596-13812655 [+]

Database links

Mature cel-miR-2218a-5p

Accession MIMAT0011455
Description Caenorhabditis elegans cel-miR-2218a-5p mature miRNA
Sequence 1 - CAAACUACAAGUUUUAAGCCUCA - 23
Evidence experimental
Illumina [1]

Mature cel-miR-2218a-3p

Accession MIMAT0011456
Description Caenorhabditis elegans cel-miR-2218a-3p mature miRNA
Sequence 38 - AGGCCAGAAUAGUGUAGUUUGUA - 60
Evidence experimental
Illumina [1]
Database links

References

  1. PubMed ID: 19460142
    Dynamic expression of small non-coding RNAs, including novel microRNAs and piRNAs/21U-RNAs, during Caenorhabditis elegans development
    Kato M, de Lencastre A, Pincus Z, Slack FJ
    Genome Biol (2009) 10:R54