Stem-loop cbr-mir-35b-3

Accession

MI0010991

Description

Caenorhabditis briggsae cbr-mir-35b-3 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

uggucuggaucggaccuccaccgauuuuuucugcggugauacuccaaugggacgauuaUCACCGGGUGAAAACUGGUAGAGguccgauccagucagacca
((((((((((((((((((.((((.(((((.((.((((((((((((....))).)..)))))))))).))))).)))).))))))))))))....))))))

Structure

      ----            c    a     u  g        -- -   a 
uggucu    ggaucggaccuc accg uuuuu cu cggugaua  c ucc a
||||||    |||||||||||| |||| ||||| || ||||||||  | |||  
accaga    ccuagccugGAG UGGU AAAAG GG GCCACUau  g agg u
      cuga            A    C     U  -        ua c   g 

Annotation confidence Not enough data

Genome context

chrX: 15372198-15372297 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35b-3

Mature cbr-miR-35b

• Accession: MIMAT0011483
• Description: Caenorhabditis briggsae cbr-miR-35b mature miRNA
• Sequence: 59 - UCACCGGGUGAAAACUGGUAGAG - 81
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074