Stem-loop cbr-mir-35b-13

Accession

MI0011001

Description

Caenorhabditis briggsae cbr-mir-35b-13 precursor miRNA

Gene family

MIPF0000096; mir-36

Sequence

cugggucggaccucugcugguauucucugcgaugauauuuugaaaaaagcuuaUCACCGGGUGAAAACUGGUAGAGguccgauccagu
(((((((((((((((((((((.(((((((.(.(((((..((......))..)))))))))).))).))))))))))))))))))))).

Structure

-                     a   -    c a     uu  ga 
 cugggucggaccucugcuggu uuc ucug g ugaua  uu  a
 ||||||||||||||||||||| ||| |||| | |||||  ||   
 gaccuagccugGAGAUGGUCA AAG GGGC C ACUau  ga  a
u                     A   U    - -     uc  aa 

Annotation confidence Not enough data

Genome context

chrX: 15373775-15373862 [+]

Clustered miRNAs

20 other miRNAs are < 10 kb from cbr-mir-35b-13

Mature cbr-miR-35b

• Accession: MIMAT0011483
• Description: Caenorhabditis briggsae cbr-miR-35b mature miRNA
• Sequence: 54 - UCACCGGGUGAAAACUGGUAGAG - 76
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074