Stem-loop cbr-mir-2222-2

Accession

MI0011007

Description

Caenorhabditis briggsae cbr-mir-2222-2 precursor miRNA

Gene family

MIPF0001012; mir-2222

Sequence

caugaauggucagguuaccagucgaccugugcugccucuuucuuucgugauauuuuucacagcguaaaaaUAUCACAAGAACAGAUCCAGCACaggucguuuaccugacauuuau
.(((((((.((((((.......((((((((((((..((((((((..(((((((((((........)))))))))))))))).)))..))))))))))))...)))))))))))))

Structure

c       g      uaccagu            cc   -     uc           cac 
 augaaug ucaggu       cgaccugugcug  ucu uucuu  gugauauuuuu   a
 ||||||| ||||||       ||||||||||||  ||| |||||  |||||||||||    
 uauuuac agucca       gcuggaCACGAC  AGA AAGAA  CACUAUaaaaa   g
-       -      ----uuu            CU   C     --           ugc 

Annotation confidence Not enough data

Genome context

chrX: 20537156-20537270 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from cbr-mir-2222-2

Mature cbr-miR-2222

• Accession: MIMAT0011487
• Description: Caenorhabditis briggsae cbr-miR-2222 mature miRNA
• Sequence: 71 - UAUCACAAGAACAGAUCCAGCAC - 93
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19755563
   Repertoire and evolution of miRNA genes in four divergent nematode species
   "de Wit E, Linsen SE, Cuppen E, Berezikov E"
   "Genome Res (2009) 19:2064-2074